Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium herbicidovorans |
| Strain | NBRC 16415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
756013 bp
Thymine Count
758507 bp
Guanine Count
1269115 bp
Cytosine Count
1248691 bp
Genome Length
4032326 bp
Protein-coding Genes
3880 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis protein ccme | BV98_000144 | Not Available | Negative | 151208 - 151999 | 27815.5 |
| patatin | BV98_000145 | Not Available | Negative | 151996 - 153174 | 43150.8 |
| zinc metalloprotease | BV98_000146 | Not Available | Positive | 153319 - 154194 | 31227.8 |
| ppe-repeat protein | BV98_000147 | Not Available | Negative | 154204 - 154536 | 11073.1 |
| hypothetical protein | BV98_000148 | Not Available | Positive | 154617 - 154775 | 5827.87 |
| glutamate-ammonia ligase adenylyltransferase | BV98_000149 | Not Available | Positive | 154875 - 157595 | 98844.8 |
| thiol peroxidase, bcp-type | BV98_000150 | Not Available | Positive | 157579 - 158040 | 16392.6 |
| rhamnosyltransferase | BV98_000151 | Not Available | Positive | 158037 - 158846 | 29641.8 |
| membrane protein precursor | BV98_000152 | Not Available | Positive | 158955 - 159677 | 25050.8 |
| heme biosynthesis protein hemy | BV98_000153 | Not Available | Positive | 159767 - 160093 | 10834.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

