Delftia sp. RIT313

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Delftia

Description

Delftia sp. RIT313 is characterized by the presence of flagella, which suggests that it has the capability for motility. This trait can play a significant role in its ecological interactions, allowing the organism to navigate its environment effectively and potentially influencing its ability to colonize various niches. Genomic analysis of Delftia sp. RIT313 indicates that it has a single replicon, which is significant for its genetic stability and replication process. The genome is accessible under the accession number JFYT00000000.1, which facilitates further research and comparison with other strains within the Delftia genus. The motility conferred by flagella, combined with its genomic characteristics, may provide insights into the ecological roles that Delftia sp. RIT313 plays in its environment. Such traits may enhance its adaptability in diverse habitats by enabling it to respond to environmental changes, such as nutrient availability or competition with other microorganisms. Overall, Delftia sp. RIT313 exemplifies the complexity of microbial life, showcasing traits that contribute to its survival and ecological dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusDelftia
SpeciesDelftia sp. RIT313
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Delftia sp. RIT313 contigs99, whole genome shotgun sequence.

Gene Summary

Adenine Count

1108990 bp

Thymine Count

1108595 bp

Guanine Count

2240050 bp

Cytosine Count

2240725 bp

Genome Length

6698360 bp

Protein-coding Genes

5816 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alcohol dehydrogenase zinc-binding domain proteinBW39_02348Not AvailablePositive2611912 - 261294035833.4
hypothetical proteinBW39_02349Not AvailablePositive2613238 - 261399626866.6
polar amino acid transport system substrate-binding proteinBW39_02350Not AvailablePositive2614248 - 261501828480.3
polar amino acid transport system permeaseBW39_02351Not AvailablePositive2615084 - 261586627674.2
polar amino acid transport system atp-binding proteinBW39_02352Not AvailablePositive2615863 - 261662127633.6
penicillin-binding protein 2BW39_02353Not AvailableNegative2616690 - 261873574942.2
rod shape-determining protein mredBW39_02354Not AvailableNegative2618749 - 261926718627.8
rod shape-determining protein mrecBW39_02355Not AvailableNegative2619264 - 262033738471.9
cell shape determining protein, mreb/mrl familyBW39_02356Not AvailableNegative2620522 - 262156536746.8
aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit cBW39_02357Not AvailablePositive2621778 - 262207710827.9

Displaying genes 2491 – 2500 of 6025 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.