Delftia sp. RIT313

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Delftia

Description

Delftia sp. RIT313 is characterized by the presence of flagella, which suggests that it has the capability for motility. This trait can play a significant role in its ecological interactions, allowing the organism to navigate its environment effectively and potentially influencing its ability to colonize various niches. Genomic analysis of Delftia sp. RIT313 indicates that it has a single replicon, which is significant for its genetic stability and replication process. The genome is accessible under the accession number JFYT00000000.1, which facilitates further research and comparison with other strains within the Delftia genus. The motility conferred by flagella, combined with its genomic characteristics, may provide insights into the ecological roles that Delftia sp. RIT313 plays in its environment. Such traits may enhance its adaptability in diverse habitats by enabling it to respond to environmental changes, such as nutrient availability or competition with other microorganisms. Overall, Delftia sp. RIT313 exemplifies the complexity of microbial life, showcasing traits that contribute to its survival and ecological dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusDelftia
SpeciesDelftia sp. RIT313
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Delftia sp. RIT313 contigs99, whole genome shotgun sequence.

Gene Summary

Adenine Count

1108990 bp

Thymine Count

1108595 bp

Guanine Count

2240050 bp

Cytosine Count

2240725 bp

Genome Length

6698360 bp

Protein-coding Genes

5816 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amp-dependent synthetase and ligaseBW39_02278Not AvailableNegative2535401 - 253699957325.1
transcriptional regulator, lysr familyBW39_02279Not AvailableNegative2537175 - 253817336423.0
protein-(glutamine-n5) methyltransferase, ribosomal protein l3-specificBW39_02280Not AvailableNegative2538175 - 253915234704.1
succinyl-diaminopimelate desuccinylaseBW39_02281Not AvailableNegative2539173 - 254033341980.9
twitching motility proteinBW39_02282Not AvailableNegative2540420 - 254170947054.0
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseBW39_02283Not AvailableNegative2541770 - 254259429255.0
succinyldiaminopimelate transaminaseBW39_02284Not AvailableNegative2542646 - 254385143636.9
methyl-accepting chemotaxis sensory transducerBW39_02285Not AvailablePositive2544040 - 254557853794.3
electron transport complex, rnfabcdge type, b subunitBW39_02286Not AvailableNegative2545607 - 254632324792.4
poly(3-hydroxybutyrate) depolymeraseBW39_02287Not AvailableNegative2546347 - 254772051208.4

Displaying genes 2421 – 2430 of 6025 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.