Delftia sp. RIT313

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Delftia

Description

Delftia sp. RIT313 is characterized by the presence of flagella, which suggests that it has the capability for motility. This trait can play a significant role in its ecological interactions, allowing the organism to navigate its environment effectively and potentially influencing its ability to colonize various niches. Genomic analysis of Delftia sp. RIT313 indicates that it has a single replicon, which is significant for its genetic stability and replication process. The genome is accessible under the accession number JFYT00000000.1, which facilitates further research and comparison with other strains within the Delftia genus. The motility conferred by flagella, combined with its genomic characteristics, may provide insights into the ecological roles that Delftia sp. RIT313 plays in its environment. Such traits may enhance its adaptability in diverse habitats by enabling it to respond to environmental changes, such as nutrient availability or competition with other microorganisms. Overall, Delftia sp. RIT313 exemplifies the complexity of microbial life, showcasing traits that contribute to its survival and ecological dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusDelftia
SpeciesDelftia sp. RIT313
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Delftia sp. RIT313 contigs99, whole genome shotgun sequence.

Gene Summary

Adenine Count

1108990 bp

Thymine Count

1108595 bp

Guanine Count

2240050 bp

Cytosine Count

2240725 bp

Genome Length

6698360 bp

Protein-coding Genes

5816 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polar amino acid abc transporter, inner membrane subunitBW39_01788Not AvailableNegative2005927 - 200700938329.4
general l-amino acid transport system permeaseBW39_01789Not AvailableNegative2007027 - 200806736301.9
general l-amino acid transport system substrate-binding proteinBW39_01790Not AvailableNegative2008088 - 200912536816.1
transcriptional regulator, rpir familyBW39_01791Not AvailableNegative2009122 - 201009934331.1
major facilitator superfamily mfs_1BW39_01792Not AvailablePositive2010250 - 201102026518.7
lysine exporter protein (lyse/ygga)BW39_01793Not AvailablePositive2011017 - 201165522609.6
plasmid stabilization systemBW39_01794Not AvailableNegative2011705 - 201201311891.2
addiction module antidote protein, familyBW39_01795Not AvailableNegative2012010 - 201228510013.8
antibiotic biosynthesis monooxygenaseBW39_01796Not AvailableNegative2012503 - 201280811318.4
nad(p)h quinone oxidoreductase, pig3 familyBW39_01797Not AvailableNegative2012976 - 201397134835.1

Displaying genes 1931 – 1940 of 6025 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.