Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Janthinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Janthinobacterium |
| Species | Janthinobacterium lividum |
| Strain | strain RIT308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oncorhynchus mykiss, Groenlandia densa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152864 bp
Thymine Count
1159821 bp
Guanine Count
1946890 bp
Cytosine Count
1953166 bp
Genome Length
6212741 bp
Protein-coding Genes
5393 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clpa/b-type chaperone protein | BW37_01630 | Not Available | Negative | 1773795 - 1776437 | 95010.4 |
| type vi secretion system lysozyme-like family protein hsif | BW37_01631 | Not Available | Negative | 1776434 - 1776910 | 16747.1 |
| type vi secretion system effector hcp1 family protein | BW37_01632 | Not Available | Negative | 1776977 - 1777468 | 17685.9 |
| ype vi secretion protein, impa family | BW37_01633 | Not Available | Negative | 1777500 - 1778990 | 54586.5 |
| type vi secretion protein | BW37_01634 | Not Available | Negative | 1778992 - 1779501 | 18978.6 |
| tetratricopeptide tpr_2 repeat containing protein | BW37_01635 | Not Available | Negative | 1779539 - 1780135 | 20282.3 |
| type vi secretion lipoprotein family protein | BW37_01636 | Not Available | Positive | 1780413 - 1780997 | 20493.0 |
| type vi secretion system protein, family | BW37_01637 | Not Available | Positive | 1781035 - 1782405 | 49742.0 |
| type vi secretion system inner membrane protein dotu family protein | BW37_01638 | Not Available | Positive | 1782402 - 1783190 | 28980.2 |
| ompa/motb domain containing protein | BW37_01639 | Not Available | Negative | 1783318 - 1784106 | 27709.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

