Janthinobacterium lividum strain RIT308

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Janthinobacterium

Description

Janthinobacterium lividum strain RIT308 is a Gram-negative, aerobic, rod-shaped bacterium that possesses flagella, allowing for mobility. This strain has been noted for its association with several hosts, including Homo sapiens (humans), Oncorhynchus mykiss (rainbow trout), and Groenlandia densa (a type of aquatic plant). The optimal growth temperature for strain RIT308 is 25 degrees Celsius, indicating a preference for moderate environmental conditions. It contains a single replicon, which is a characteristic of its genetic structure. Importantly, Janthinobacterium lividum strain RIT308 is associated with health effects, specifically septicaemia, which is a serious bloodstream infection. This highlights its potential pathogenicity, particularly in human hosts and possibly in other organisms. In an ecological context, the presence of Janthinobacterium lividum in diverse environments suggests its adaptability and potential role in various ecosystems. Its association with both aquatic and terrestrial hosts indicates that it may play a role in the microbial dynamics of these environments, potentially influencing host health and ecosystem function. The understanding of its pathogenic potential, especially in relation to septicaemia, underscores the importance of studying this bacterium within both clinical and environmental microbiology. Accessions for further study of Janthinobacterium lividum strain RIT308 are available under the identifier JFYR00000000.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusJanthinobacterium
SpeciesJanthinobacterium lividum
Strainstrain RIT308

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Janthinobacterium lividum strain RIT308
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens, Oncorhynchus mykiss, Groenlandia densa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Janthinobacterium lividum strain RIT308 contigs9, whole genome

Gene Summary

Adenine Count

1152864 bp

Thymine Count

1159821 bp

Guanine Count

1946890 bp

Cytosine Count

1953166 bp

Genome Length

6212741 bp

Protein-coding Genes

5393 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-quinone oxidoreductase subunit iBW37_01570Not AvailableNegative1719142 - 171963018485.2
nadh-quinone oxidoreductase subunit hBW37_01571Not AvailableNegative1719645 - 172072740181.5
nadh-quinone oxidoreductase subunit gBW37_01572Not AvailableNegative1720727 - 172306082351.0
nadh-quinone oxidoreductase subunit fBW37_01573Not AvailableNegative1723083 - 172437847680.3
nadh-quinone oxidoreductase subunit eBW37_01574Not AvailableNegative1724375 - 172485417545.3
nadh-quinone oxidoreductase subunit dBW37_01575Not AvailableNegative1724867 - 172612047584.4
nadh-quinone oxidoreductase subunit cBW37_01576Not AvailableNegative1726120 - 172671322692.1
nadh-quinone oxidoreductase subunit bBW37_01577Not AvailableNegative1726731 - 172720717377.3
nadh-quinone oxidoreductase subunit aBW37_01578Not AvailableNegative1727211 - 172757013692.0
Trna-leuNot AvailableNot AvailablePositive1727748 - 1727832Not Available

Displaying genes 1591 – 1600 of 5535 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
SepticaemiaCausesPMC7040248

Displaying health effects 1 – 1 of 1 in total