Micrococcus luteus strain RIT305

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Micrococcus

Description

Micrococcus luteus strain RIT305 is a Gram-positive, cocci-shaped bacterium that typically arranges itself in tetrads. This strain is categorized as an aerobe, indicating that it requires oxygen for growth. It is non-motile, lacking flagella, and has a mesophilic temperature range with an optimal growth temperature of 29°C. The strain possesses a single membrane and a single replicon. Micrococcus luteus strain RIT305 has been identified as a free-living organism, with known hosts including Homo sapiens and Triticum aestivum. This strain is associated with several health effects in humans, including bacteremia, peritonitis, infections related to peritoneal dialysis, sepsis, and osteoarthritis, particularly knee osteoarthritis. Such associations highlight its pathogenic potential, particularly in immunocompromised individuals or those with underlying health conditions. The presence of Micrococcus luteus in diverse habitats and its ability to interact with human hosts underscore its ecological significance. The strain's role in both health and disease illustrates the complex nature of microbial relationships and emphasizes the need for further research into its environmental interactions and pathogenic mechanisms. Understanding the balance between the bacterium's free-living characteristics and its potential to cause disease could provide insights into managing infections and promoting health in affected populations.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusMicrococcus
SpeciesMicrococcus luteus
Strainstrain RIT305

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Micrococcus luteus strain RIT305
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature29
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Triticum aestivum, Lasius niger
Cell arrangementTetrads
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Micrococcus luteus strain RIT305 contigs99, whole genome shotgun

Gene Summary

Adenine Count

352648 bp

Thymine Count

353237 bp

Guanine Count

955212 bp

Cytosine Count

951284 bp

Genome Length

2612381 bp

Protein-coding Genes

2342 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exonuclease sbccBW36_00671Not AvailableNegative715067 - 718111107887.0
exonuclease sbccd, d subunitBW36_00672Not AvailableNegative718108 - 71933143778.6
adp-ribosylglycohydrolaseBW36_00673Not AvailablePositive719398 - 72055238452.2
exonuclease, dna polymerase iii, epsilon subunit familyBW36_00674Not AvailableNegative720558 - 72170340666.0
non-canonical purine ntp pyrophosphataseBW36_00675Not AvailableNegative721700 - 72238923522.8
ribonuclease phBW36_00676Not AvailableNegative722386 - 72315026713.7
metal-dependent hydrolase, beta-lactamase superfamily iiiBW36_00677Not AvailableNegative723173 - 72398829218.5
glutamate racemaseBW36_00678Not AvailableNegative723985 - 72491732558.9
hypothetical proteinBW36_00679Not AvailableNegative724914 - 72568127127.5
atp-dependent clp protease adapter protein clpsBW36_00680Not AvailableNegative725690 - 72605213308.7

Displaying genes 691 – 700 of 2407 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Peritoneal dialysis infectionCausesPMC10292988
BacteremiaCausesPMC10292988
PeritonitisCausesPMC10292988
OaCausesPMC12866835
Knee oaCausesPMC12866835
SepsisCausesPMC12866835

Displaying health effects 1 – 6 of 6 in total