Micrococcus luteus strain RIT304

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Micrococcus

Description

Micrococcus luteus strain RIT304 is a Gram-positive, non-motile coccus characterized by its tetrad arrangement. This strain is classified as an aerobic organism, requiring oxygen for its growth and metabolic processes. It thrives optimally at a temperature of 29°C, falling within the mesophilic temperature range. Micrococcus luteus strain RIT304 has a single replicon and one membrane, reflecting its simple cellular structure. This strain is free-living, meaning it does not rely on a host for survival, although it has been isolated from humans (Homo sapiens) and wheat (Triticum aestivum). It is important to note that M. luteus strain RIT304 is associated with various health effects, including bacteremia, peritonitis, infections related to peritoneal dialysis, sepsis, and osteoarthritis (OA), particularly in knee OA. These associations indicate its pathogenic potential in humans, despite its free-living lifestyle. The presence of Micrococcus luteus in diverse habitats, including human environments and agricultural settings, underscores its ecological versatility. Its ability to thrive in multiple environments may contribute to its role in both health and disease. The strain's pathogenicity highlights the importance of monitoring and understanding the dynamics of such microorganisms in clinical and ecological contexts. Further research on M. luteus strain RIT304 could provide insights into its behavior and interactions within different environments, especially regarding its impact on human health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusMicrococcus
SpeciesMicrococcus luteus
Strainstrain RIT304

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Micrococcus luteus strain RIT304
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature29
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Triticum aestivum, Lasius niger
Cell arrangementTetrads
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Micrococcus luteus strain RIT304 contigs99, whole genome shotgun

Gene Summary

Adenine Count

337514 bp

Thymine Count

338277 bp

Guanine Count

916560 bp

Cytosine Count

914478 bp

Genome Length

2506829 bp

Protein-coding Genes

2248 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr substrate binding domain proteinBW35_02216Not AvailableNegative2412767 - 241367231742.3
carboxymethylenebutenolidaseBW35_02217Not AvailableNegative2413756 - 241448125941.1
ycei-like domain proteinBW35_02218Not AvailableNegative2414554 - 241510519714.9
glutamate dehydrogenaseBW35_02219Not AvailableNegative2415403 - 241668345796.3
hpch/hpai aldolase/citrate lyase family proteinBW35_02220Not AvailablePositive2417028 - 241799333807.8
membrane proteinBW35_02221Not AvailableNegative2418104 - 241960952685.7
tricarboxylate transport protein tctbBW35_02222Not AvailableNegative2419611 - 242017119109.4
hypothetical proteinBW35_02223Not AvailableNegative2420168 - 242117535064.3
universal stress family proteinBW35_02224Not AvailablePositive2421352 - 242170212105.4
Trna-leuNot AvailableNot AvailablePositive2421874 - 2421960Not Available

Displaying genes 2211 – 2220 of 2301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Peritoneal dialysis infectionCausesPMC10292988
BacteremiaCausesPMC10292988
PeritonitisCausesPMC10292988
OaCausesPMC12866835
Knee oaCausesPMC12866835
SepsisCausesPMC12866835

Displaying health effects 1 – 6 of 6 in total