Micrococcus luteus strain RIT304

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Micrococcus

Description

Micrococcus luteus strain RIT304 is a Gram-positive, non-motile coccus characterized by its tetrad arrangement. This strain is classified as an aerobic organism, requiring oxygen for its growth and metabolic processes. It thrives optimally at a temperature of 29°C, falling within the mesophilic temperature range. Micrococcus luteus strain RIT304 has a single replicon and one membrane, reflecting its simple cellular structure. This strain is free-living, meaning it does not rely on a host for survival, although it has been isolated from humans (Homo sapiens) and wheat (Triticum aestivum). It is important to note that M. luteus strain RIT304 is associated with various health effects, including bacteremia, peritonitis, infections related to peritoneal dialysis, sepsis, and osteoarthritis (OA), particularly in knee OA. These associations indicate its pathogenic potential in humans, despite its free-living lifestyle. The presence of Micrococcus luteus in diverse habitats, including human environments and agricultural settings, underscores its ecological versatility. Its ability to thrive in multiple environments may contribute to its role in both health and disease. The strain's pathogenicity highlights the importance of monitoring and understanding the dynamics of such microorganisms in clinical and ecological contexts. Further research on M. luteus strain RIT304 could provide insights into its behavior and interactions within different environments, especially regarding its impact on human health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusMicrococcus
SpeciesMicrococcus luteus
Strainstrain RIT304

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Micrococcus luteus strain RIT304
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature29
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Triticum aestivum, Lasius niger
Cell arrangementTetrads
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Micrococcus luteus strain RIT304 contigs99, whole genome shotgun

Gene Summary

Adenine Count

337514 bp

Thymine Count

338277 bp

Guanine Count

916560 bp

Cytosine Count

914478 bp

Genome Length

2506829 bp

Protein-coding Genes

2248 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-valNot AvailableNot AvailablePositive2122880 - 2122951Not Available
Trna-cysNot AvailableNot AvailablePositive2123010 - 2123080Not Available
Trna-glyNot AvailableNot AvailablePositive2123099 - 2123172Not Available
hypothetical proteinBW35_01949Not AvailablePositive2123373 - 212431733669.6
peptide deformylaseBW35_01950Not AvailablePositive2124314 - 212489820118.2
methionyl-trna formyltransferaseBW35_01951Not AvailablePositive2124895 - 212599537518.6
putative ribosomal rna small subunit methyltransferase bBW35_01952Not AvailablePositive2125992 - 212762356892.7
ribulose-phosphate 3-epimeraseBW35_01953Not AvailablePositive2127640 - 212831123538.3
nicotinamide mononucleotide transporter pnucBW35_01954Not AvailablePositive2128633 - 212933725629.2
hypothetical proteinBW35_01955Not AvailableNegative2129223 - 213040137430.3

Displaying genes 1941 – 1950 of 2301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Peritoneal dialysis infectionCausesPMC10292988
BacteremiaCausesPMC10292988
PeritonitisCausesPMC10292988
OaCausesPMC12866835
Knee oaCausesPMC12866835
SepsisCausesPMC12866835

Displaying health effects 1 – 6 of 6 in total