Microbacterium oleivorans strain RIT293

Gram-positiveRodAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium oleivorans strain RIT293 is a Gram-positive, rod-shaped bacterium that thrives in dust environments. It is classified as an aerobe, indicating that it requires oxygen for its metabolic processes. This strain is mesophilic, meaning it grows optimally at moderate temperatures, though specific temperature ranges are not provided. Notably, Microbacterium oleivorans strain RIT293 possesses a single replicon, which is relevant for understanding its genetic structure and replication mechanisms. The accession number for this strain is JFYO00000000.1, which can be used for further reference in genomic databases. The ecological significance of Microbacterium oleivorans strain RIT293 can be appreciated in the context of its habitat. Dust is a dynamic environment that can serve as a reservoir for various microorganisms. The presence of aerobic bacteria like M. oleivorans in dust indicates its potential role in nutrient cycling and organic matter decomposition. This strain may contribute to the microbial diversity and functional capabilities of dust microbiomes, impacting soil health and atmospheric processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium oleivorans
Strainstrain RIT293

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangemesophilic
Habitatdust
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium oleivorans strain RIT293 contigs9, whole genome

Gene Summary

Adenine Count

449461 bp

Thymine Count

448385 bp

Guanine Count

999544 bp

Cytosine Count

1001232 bp

Genome Length

2898622 bp

Protein-coding Genes

2781 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative hydrolaseBW34_02414Not AvailablePositive2458886 - 245964425984.9
dimethylarginine dimethylaminohydrolaseBW34_02415Not AvailableNegative2459720 - 246062833321.6
adenosine deaminaseBW34_02416Not AvailableNegative2460789 - 246190440357.2
thymidine phosphorylaseBW34_02417Not AvailableNegative2461928 - 246322044805.8
cytidine deaminaseBW34_02418Not AvailableNegative2463217 - 246361514074.8
abc-type transporter, integral membrane subunitBW34_02419Not AvailableNegative2463665 - 246495145073.4
abc-type transporter, integral membrane subunitBW34_02420Not AvailableNegative2464948 - 246625845959.6
abc transporterBW34_02421Not AvailableNegative2466255 - 246776954139.4
membrane proteinBW34_02422Not AvailableNegative2467883 - 246900738077.3
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomeraseBW34_02423Not AvailableNegative2469171 - 247028339757.4

Displaying genes 2411 – 2420 of 2831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

283 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 283 metabolites

Health Effects

No health effects information available for this bacterium.