Cupriavidus sp. SK-4

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus sp. SK-4 is a Gram-negative bacterium characterized by the presence of flagella, which likely contributes to its motility. This species contains a single replicon, indicating a streamlined genetic architecture that may facilitate efficient replication and adaptation to various environments. The genomic information for Cupriavidus sp. SK-4 is cataloged under the accession number JFJW00000000.1, which provides a basis for further genetic and functional studies. Cupriavidus species are known for their versatility in different ecological niches, often exhibiting capabilities such as metal resistance and bioremediation potential. The presence of flagella in Cupriavidus sp. SK-4 suggests that it may have the ability to navigate its environment effectively, which could be advantageous in locating nutrient sources or escaping unfavorable conditions. Understanding the traits of Cupriavidus sp. SK-4 can enhance knowledge of its ecological roles, particularly in biogeochemical cycles where Gram-negative bacteria often participate. The single replicon structure may also indicate a specialization that allows for efficient resource use, which could be significant in environments where competition for nutrients is high. This insight into its biological traits underscores the importance of studying microbial diversity and adaptability in various ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCupriavidus
SpeciesCupriavidus sp. SK-4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cupriavidus sp. SK-4 Scaffold247, whole genome shotgun sequence.

Gene Summary

Adenine Count

1300695 bp

Thymine Count

1301123 bp

Guanine Count

2553571 bp

Cytosine Count

2555338 bp

Genome Length

7720227 bp

Protein-coding Genes

6717 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate abc transporter permeaseCF68_25705Not AvailableNegative2606016 - 260674126856.1
abc transporter substrate-binding proteinCF68_25710Not AvailableNegative2606899 - 260780132235.4
endoribonuclease l-pspCF68_25715Not AvailableNegative2607952 - 260841315840.1
pyridoxal-5'-phosphate-dependent proteinCF68_25720Not AvailableNegative2608474 - 260945133686.7
dimethylmenaquinone methyltransferaseCF68_25725Not AvailableNegative2609585 - 261022922161.7
diguanylate cyclaseCF68_25730Not AvailableNegative2610229 - 261090924201.0
diguanylate cyclaseCF68_25735Not AvailableNegative2610931 - 261159023378.0
lysr family transcriptional regulatorCF68_25740Not AvailablePositive2611774 - 261268533355.8
tetr family transcriptional regulatorCF68_25745Not AvailableNegative2612750 - 261345426175.8
geraniol dehydrogenaseCF68_25750Not AvailablePositive2613681 - 261479037811.0

Displaying genes 2321 – 2330 of 6791 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.