Cupriavidus sp. SK-4

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus sp. SK-4 is a Gram-negative bacterium characterized by the presence of flagella, which likely contributes to its motility. This species contains a single replicon, indicating a streamlined genetic architecture that may facilitate efficient replication and adaptation to various environments. The genomic information for Cupriavidus sp. SK-4 is cataloged under the accession number JFJW00000000.1, which provides a basis for further genetic and functional studies. Cupriavidus species are known for their versatility in different ecological niches, often exhibiting capabilities such as metal resistance and bioremediation potential. The presence of flagella in Cupriavidus sp. SK-4 suggests that it may have the ability to navigate its environment effectively, which could be advantageous in locating nutrient sources or escaping unfavorable conditions. Understanding the traits of Cupriavidus sp. SK-4 can enhance knowledge of its ecological roles, particularly in biogeochemical cycles where Gram-negative bacteria often participate. The single replicon structure may also indicate a specialization that allows for efficient resource use, which could be significant in environments where competition for nutrients is high. This insight into its biological traits underscores the importance of studying microbial diversity and adaptability in various ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCupriavidus
SpeciesCupriavidus sp. SK-4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cupriavidus sp. SK-4 Scaffold247, whole genome shotgun sequence.

Gene Summary

Adenine Count

1300695 bp

Thymine Count

1301123 bp

Guanine Count

2553571 bp

Cytosine Count

2555338 bp

Genome Length

7720227 bp

Protein-coding Genes

6717 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorCF68_21150Not AvailableNegative1759145 - 176003533747.8
2-hydroxy-acid oxidaseCF68_21155Not AvailableNegative1760050 - 176148050911.7
atp--cobalamin adenosyltransferaseCF68_21160Not AvailablePositive1761800 - 176236620196.2
molecular chaperone dnakCF68_21165Not AvailablePositive1762557 - 176450969881.0
molecular chaperone dnajCF68_21170Not AvailablePositive1764681 - 176582641374.7
aminodeoxychorismate synthaseCF68_21175Not AvailablePositive1765934 - 176786267468.7
abc transporter atp-binding proteinCF68_21180Not AvailableNegative1767872 - 176857025113.5
abc transporter permeaseCF68_21185Not AvailableNegative1768567 - 176926524273.5
3-methyl-2-oxobutanoate hydroxymethyltransferaseCF68_21190Not AvailableNegative1769270 - 177009128707.9
deoxynucleoside kinaseCF68_21195Not AvailableNegative1770191 - 177083223980.9

Displaying genes 1591 – 1600 of 6791 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.