Cupriavidus sp. SK-3

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus sp. SK-3 is a Gram-negative bacterium characterized by the presence of flagella, which are likely to contribute to its motility. This organism possesses a single replicon, indicating a streamlined genome structure that may facilitate efficient replication and adaptation to its environment. The genome of Cupriavidus sp. SK-3 is cataloged under the accession number JFJV00000000.2, providing a reference for further genomic studies. As a member of the Cupriavidus genus, this species may play a role in biogeochemical processes, particularly in relation to metal cycling and environmental remediation. The traits of having flagella suggest that Cupriavidus sp. SK-3 might be capable of moving toward favorable environmental conditions, which can enhance its ecological interactions and survival strategies. Understanding the characteristics of Cupriavidus sp. SK-3 can provide insights into its potential applications in biotechnology, especially in areas such as bioremediation and bioenergy production, where its motility and metabolic capabilities may be leveraged to improve processes. Overall, the traits of Cupriavidus sp. SK-3 highlight its adaptability and potential significance in microbial ecology and applied microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCupriavidus
SpeciesCupriavidus sp. SK-3
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cupriavidus sp. SK-3 Scaffold299, whole genome shotgun sequence.

Gene Summary

Adenine Count

1297145 bp

Thymine Count

1297235 bp

Guanine Count

2404210 bp

Cytosine Count

2417478 bp

Genome Length

7429145 bp

Protein-coding Genes

6357 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCF70_018335Not AvailableNegative5729871 - 573084833835.2
2-keto-4-pentenoate hydrataseCF70_018340Not AvailableNegative5730900 - 573169127945.7
3-(2,3-dihydroxyphenyl)propionate dioxygenaseCF70_018345Not AvailableNegative5731709 - 573265933270.9
2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolaseCF70_018355Not AvailableNegative5734572 - 573550734170.7
transcriptional regulatorCF70_018360Not AvailablePositive5735641 - 573646230246.2
abc transporter substrate-binding proteinCF70_018365Not AvailableNegative5736470 - 573747734742.2
4-hydroxy-2-oxo-heptane-1,7-dioate aldolaseCF70_018370Not AvailableNegative5737686 - 573848927673.1
2-oxo-hepta-3-ene-1,7-dioate hydrataseCF70_018375Not AvailableNegative5738503 - 573930628968.7
5-carboxymethyl-2-hydroxymuconate isomeraseCF70_018380Not AvailableNegative5739352 - 573974114395.3
3,4-dihydroxyphenylacetate 2,3-dioxygenaseCF70_018385Not AvailableNegative5739787 - 574063531683.5

Displaying genes 4961 – 4970 of 6439 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.