Cupriavidus sp. SK-3

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus sp. SK-3 is a Gram-negative bacterium characterized by the presence of flagella, which are likely to contribute to its motility. This organism possesses a single replicon, indicating a streamlined genome structure that may facilitate efficient replication and adaptation to its environment. The genome of Cupriavidus sp. SK-3 is cataloged under the accession number JFJV00000000.2, providing a reference for further genomic studies. As a member of the Cupriavidus genus, this species may play a role in biogeochemical processes, particularly in relation to metal cycling and environmental remediation. The traits of having flagella suggest that Cupriavidus sp. SK-3 might be capable of moving toward favorable environmental conditions, which can enhance its ecological interactions and survival strategies. Understanding the characteristics of Cupriavidus sp. SK-3 can provide insights into its potential applications in biotechnology, especially in areas such as bioremediation and bioenergy production, where its motility and metabolic capabilities may be leveraged to improve processes. Overall, the traits of Cupriavidus sp. SK-3 highlight its adaptability and potential significance in microbial ecology and applied microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCupriavidus
SpeciesCupriavidus sp. SK-3
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cupriavidus sp. SK-3 Scaffold299, whole genome shotgun sequence.

Gene Summary

Adenine Count

1297145 bp

Thymine Count

1297235 bp

Guanine Count

2404210 bp

Cytosine Count

2417478 bp

Genome Length

7429145 bp

Protein-coding Genes

6357 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dnaaseCF70_010265Not AvailableNegative4099899 - 410069330230.9
isovaleryl-coa dehydrogenaseCF70_010270Not AvailableNegative4100829 - 410263765400.6
coa-transferaseCF70_010275Not AvailableNegative4102679 - 410391443534.8
abc transporter substrate-binding proteinCF70_010280Not AvailableNegative4103954 - 410493134025.5
lysr family transcriptional regulatorCF70_010285Not AvailablePositive4105089 - 410598532397.5
phosphinothricin acetyltransferaseCF70_010290Not AvailableNegative4106001 - 410652218973.6
pilus assembly proteinCF70_010295Not AvailableNegative4106571 - 410699314817.0
dna polymerase iii subunit delta'CF70_010300Not AvailableNegative4107078 - 410808536782.2
thymidylate kinaseCF70_010305Not AvailableNegative4108203 - 410881722868.3
aminodeoxychorismate lyaseCF70_010310Not AvailableNegative4108826 - 410982136253.6

Displaying genes 3541 – 3550 of 6439 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.