Cupriavidus sp. SK-3

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus sp. SK-3 is a Gram-negative bacterium characterized by the presence of flagella, which are likely to contribute to its motility. This organism possesses a single replicon, indicating a streamlined genome structure that may facilitate efficient replication and adaptation to its environment. The genome of Cupriavidus sp. SK-3 is cataloged under the accession number JFJV00000000.2, providing a reference for further genomic studies. As a member of the Cupriavidus genus, this species may play a role in biogeochemical processes, particularly in relation to metal cycling and environmental remediation. The traits of having flagella suggest that Cupriavidus sp. SK-3 might be capable of moving toward favorable environmental conditions, which can enhance its ecological interactions and survival strategies. Understanding the characteristics of Cupriavidus sp. SK-3 can provide insights into its potential applications in biotechnology, especially in areas such as bioremediation and bioenergy production, where its motility and metabolic capabilities may be leveraged to improve processes. Overall, the traits of Cupriavidus sp. SK-3 highlight its adaptability and potential significance in microbial ecology and applied microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCupriavidus
SpeciesCupriavidus sp. SK-3
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cupriavidus sp. SK-3 Scaffold299, whole genome shotgun sequence.

Gene Summary

Adenine Count

1297145 bp

Thymine Count

1297235 bp

Guanine Count

2404210 bp

Cytosine Count

2417478 bp

Genome Length

7429145 bp

Protein-coding Genes

6357 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aldose epimeraseCF70_000685Not AvailableNegative2358869 - 235980434338.8
cupinCF70_000690Not AvailablePositive2360079 - 236056417759.9
poly(3-hydroxybutyrate) depolymeraseCF70_000695Not AvailableNegative2360611 - 236182545002.2
glutathione s-transferaseCF70_000700Not AvailablePositive2362307 - 236296324378.5
acetoacetyl-coa synthetaseCF70_000705Not AvailableNegative2363045 - 236506973784.4
3-octaprenyl-4-hydroxybenzoate carboxy-lyaseCF70_000710Not AvailableNegative2365216 - 236674556549.8
lytic transglycosylaseCF70_000715Not AvailablePositive2367377 - 236843536231.7
aminotransferaseCF70_000720Not AvailableNegative2368600 - 236978142559.2
n utilization substance protein bCF70_000725Not AvailableNegative2369935 - 237045618874.3
6,7-dimethyl-8-ribityllumazine synthaseCF70_000730Not AvailableNegative2370449 - 237095218002.0

Displaying genes 2041 – 2050 of 6439 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.