Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas axonopodis |
| Strain | strain DSM 3585 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
796999 bp
Thymine Count
794415 bp
Guanine Count
1444264 bp
Cytosine Count
1444687 bp
Genome Length
4480365 bp
Protein-coding Genes
3331 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | XAXN_09395 | Q3BQR9 | Negative | 2099316 - 2100380 | 38437.2 |
| 3-dehydroquinate synthase | XAXN_09405 | Q3BQS1 | Negative | 2100778 - 2101890 | 38748.7 |
| shikimate kinase | XAXN_09410 | Q3BQS2 | Negative | 2101887 - 2102429 | 19925.0 |
| pyridoxine/pyridoxamine 5'-phosphate oxidase | XAXN_09415 | Q3BQS3 | Positive | 2102598 - 2103197 | 22318.2 |
| hypothetical protein | XAXN_09420 | Not Available | Positive | 2103377 - 2103793 | 15003.7 |
| pspa-im30 family protein | XAXN_09425 | P0AF79 | Positive | 2103806 - 2104579 | 27389.4 |
| potassium channel protein | XAXN_09430 | Not Available | Positive | 2104605 - 2105687 | 38286.5 |
| hypothetical protein | XAXN_09435 | Not Available | Positive | 2105684 - 2106361 | 24806.3 |
| membrane protein | XAXN_09440 | Not Available | Positive | 2106399 - 2106803 | 13689.0 |
| lipoprotein | XAXN_09445 | Not Available | Positive | 2106816 - 2107388 | 20156.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
