Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | AZ78 unitig_4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1048103 bp
Thymine Count
1042384 bp
Guanine Count
2086961 bp
Cytosine Count
2092676 bp
Genome Length
6270124 bp
Protein-coding Genes
5260 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage protein | AZ78_0895 | Not Available | Negative | 1149368 - 1149823 | 16466.6 |
| folm alternative dihydrofolate reductase 1 | AZ78_0896 | Not Available | Negative | 1149879 - 1150580 | 25122.3 |
| hypothetical protein | AZ78_0897 | Not Available | Negative | 1150577 - 1151134 | 20600.8 |
| hypothetical protein | AZ78_0898 | Not Available | Negative | 1151322 - 1151777 | 17285.3 |
| udp-glucose 4-epimerase | AZ78_0899 | Not Available | Negative | 1151838 - 1152821 | 35728.5 |
| hypothetical protein | AZ78_0900 | Not Available | Negative | 1152998 - 1153390 | 14238.3 |
| transcriptional regulator, merr family | AZ78_0901 | Not Available | Positive | 1153436 - 1153996 | 20136.1 |
| gcn5-related n-acetyltransferase | AZ78_0902 | Not Available | Positive | 1154000 - 1154536 | 19107.0 |
| transglycosylase associated protein | AZ78_0903 | Not Available | Positive | 1154754 - 1155029 | 9481.16 |
| pyridoxamine 5'-phosphate oxidase | AZ78_0904 | Not Available | Positive | 1155098 - 1155583 | 17984.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
