Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | AZ78 unitig_4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1048103 bp
Thymine Count
1042384 bp
Guanine Count
2086961 bp
Cytosine Count
2092676 bp
Genome Length
6270124 bp
Protein-coding Genes
5260 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AZ78_0886 | Not Available | Negative | 1140310 - 1140714 | 14611.9 |
| putative tetratricopeptide repeat family protein | AZ78_0887 | Not Available | Positive | 1140896 - 1141750 | 29755.4 |
| Trna-val | Not Available | Not Available | Positive | 1142350 - 1142421 | Not Available |
| arsenate reductase | AZ78_0888 | Not Available | Positive | 1142667 - 1143032 | 13364.2 |
| ferredoxin-dependent glutamate synthase | AZ78_0889 | Not Available | Negative | 1143141 - 1144763 | 58873.3 |
| udp-glucose dehydrogenase | AZ78_0890 | Not Available | Negative | 1145307 - 1146611 | 47571.4 |
| hypothetical protein | AZ78_0891 | Not Available | Negative | 1146749 - 1147096 | 12600.4 |
| diguanylate cyclase/phosphodiesterase (ggdef & eal domains) with pas/pac sensor(s) | AZ78_0892 | Not Available | Negative | 1147096 - 1148169 | 38903.3 |
| hypothetical protein | AZ78_0893 | Not Available | Positive | 1148432 - 1148779 | 13406.5 |
| phage protein | AZ78_0894 | Not Available | Negative | 1148894 - 1149349 | 16373.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
