Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | AZ78 unitig_4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1048103 bp
Thymine Count
1042384 bp
Guanine Count
2086961 bp
Cytosine Count
2092676 bp
Genome Length
6270124 bp
Protein-coding Genes
5260 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor beta subunit | AZ78_0807 | Not Available | Negative | 1054229 - 1054531 | 10973.3 |
| ssu ribosomal protein s1p | AZ78_0808 | Not Available | Negative | 1054740 - 1056428 | 61901.7 |
| cytidylate kinase | AZ78_0809 | Not Available | Negative | 1056652 - 1057344 | 24554.2 |
| lsu ribosomal protein l36p | AZ78_0810 | Not Available | Positive | 1057650 - 1057775 | 4842.16 |
| hypothetical protein | AZ78_0811 | Not Available | Positive | 1057955 - 1058284 | 12064.8 |
| agmatine deiminase | AZ78_0812 | Not Available | Positive | 1058289 - 1059326 | 38215.7 |
| hypothetical protein | AZ78_0813 | Not Available | Negative | 1059508 - 1059657 | 4790.58 |
| hypothetical protein | AZ78_0814 | Not Available | Positive | 1059652 - 1060059 | 14695.2 |
| n-carbamoylputrescine amidase | AZ78_0815 | Not Available | Positive | 1060156 - 1061043 | 32833.9 |
| phosphinothricin n-acetyltransferase | AZ78_0816 | Not Available | Positive | 1061040 - 1061603 | 20608.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
