Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | AZ78 unitig_4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1048103 bp
Thymine Count
1042384 bp
Guanine Count
2086961 bp
Cytosine Count
2092676 bp
Genome Length
6270124 bp
Protein-coding Genes
5260 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein forms channel for type iv secretion of t-dna complex (virb10) | AZ78_0710 | Not Available | Negative | 958756 - 959991 | 43303.2 |
| type iv secretion pathway protein virb9 | AZ78_0711 | Not Available | Negative | 959988 - 960755 | 28964.5 |
| inner membrane protein forms channel for type iv secretion of t-dna complex (virb8) | AZ78_0712 | Not Available | Negative | 960752 - 961798 | 36610.3 |
| hypothetical protein | AZ78_0713 | Not Available | Negative | 961900 - 962442 | 18999.2 |
| aspartate aminotransferase | AZ78_0714 | Not Available | Negative | 962857 - 964005 | 42179.3 |
| hypothetical protein | AZ78_0715 | Not Available | Positive | 964200 - 964673 | 17027.0 |
| abc transporter involved in cytochrome c biogenesis, atpase component ccma | AZ78_0716 | Not Available | Positive | 964780 - 965841 | 36248.8 |
| abc transporter involved in cytochrome c biogenesis, ccmb subunit | AZ78_0717 | Not Available | Positive | 965852 - 966133 | 8927.56 |
| cytochrome c-type biogenesis protein ccmc, putative heme lyase for ccme | AZ78_0718 | Not Available | Positive | 966288 - 967052 | 28437.2 |
| hypothetical protein | AZ78_0719 | Not Available | Positive | 967052 - 967216 | 6439.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
