Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | AZ78 unitig_4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1048103 bp
Thymine Count
1042384 bp
Guanine Count
2086961 bp
Cytosine Count
2092676 bp
Genome Length
6270124 bp
Protein-coding Genes
5260 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii alpha subunit | AZ78_0700 | Not Available | Positive | 944243 - 947383 | 116653.0 |
| hypothetical protein | AZ78_0701 | Not Available | Positive | 947380 - 947553 | 6567.93 |
| inner membrane protein of type iv secretion of t-dna complex, virb6 | AZ78_0702 | Not Available | Negative | 949855 - 950973 | 39257.9 |
| minor pilin of type iv secretion complex, virb5 | AZ78_0703 | Not Available | Negative | 951120 - 951866 | 27748.3 |
| minor pilin of type iv secretion complex, virb5 | AZ78_0704 | Not Available | Negative | 951979 - 952749 | 28972.9 |
| type iv secretion pathway protein virb4 | AZ78_0705 | Not Available | Negative | 953048 - 955507 | 91793.1 |
| inner membrane protein forms channel for type iv secretion of t-dna complex, virb3 | AZ78_0706 | Not Available | Negative | 955662 - 955856 | 7951.14 |
| major pilus subunit of type iv secretion complex, virb2 | AZ78_0707 | Not Available | Negative | 955966 - 956352 | 13179.3 |
| bores hole in peptidoglycan layer allowing type iv secretion complex assembly to occur (virb1) | AZ78_0708 | Not Available | Negative | 956648 - 957502 | 29488.4 |
| type iv secretion pathway protein virb11 | AZ78_0709 | Not Available | Negative | 957691 - 958728 | 38683.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
