Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | AZ78 unitig_4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1048103 bp
Thymine Count
1042384 bp
Guanine Count
2086961 bp
Cytosine Count
2092676 bp
Genome Length
6270124 bp
Protein-coding Genes
5260 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein grpe | AZ78_0661 | Not Available | Negative | 903971 - 904483 | 18705.3 |
| hypothetical protein | AZ78_0662 | Not Available | Negative | 904480 - 904782 | 11371.4 |
| heat-inducible transcription repressor hrca | AZ78_0663 | Not Available | Negative | 904827 - 906053 | 44518.8 |
| hypothetical protein | AZ78_0664 | Not Available | Positive | 905916 - 906161 | 8799.47 |
| dna repair protein recn | AZ78_0665 | Not Available | Positive | 906414 - 908096 | 59793.2 |
| ferric uptake regulation protein fur | AZ78_0666 | Not Available | Negative | 908709 - 909110 | 15531.7 |
| outer membrane lipoprotein smpa | AZ78_0667 | Not Available | Positive | 909331 - 909732 | 15484.6 |
| upf0125 protein yfjf | AZ78_0668 | Not Available | Negative | 909853 - 910119 | 9709.69 |
| putative oligoketide cyclase/lipid transport protein | AZ78_0669 | Not Available | Negative | 910116 - 910592 | 17405.9 |
| tmrna-binding protein smpb | AZ78_0670 | Not Available | Positive | 910774 - 911286 | 19302.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
