Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | AZ78 unitig_4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1048103 bp
Thymine Count
1042384 bp
Guanine Count
2086961 bp
Cytosine Count
2092676 bp
Genome Length
6270124 bp
Protein-coding Genes
5260 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AZ78_0621 | Not Available | Negative | 848599 - 849435 | 30513.9 |
| hydroxymethylpyrimidine abc transporter, substrate-binding component | AZ78_0622 | Not Available | Negative | 849454 - 850497 | 37061.2 |
| hypothetical protein | AZ78_0623 | Not Available | Negative | 850577 - 851632 | 36618.4 |
| lysr family transcriptional regulator ybhd | AZ78_0624 | Not Available | Positive | 851776 - 852681 | 33571.7 |
| aconitate hydratase | AZ78_0625 | Not Available | Positive | 852866 - 855631 | 99297.5 |
| hypothetical protein | AZ78_0626 | Not Available | Positive | 855640 - 855786 | 4984.99 |
| hypothetical protein | AZ78_0627 | Not Available | Positive | 855795 - 855941 | 4995.97 |
| hypothetical protein | AZ78_0628 | Not Available | Negative | 856347 - 856811 | 16704.3 |
| long-chain-fatty-acid--coa ligase | AZ78_0629 | Not Available | Positive | 857114 - 858787 | 61193.4 |
| response regulator | AZ78_0630 | Not Available | Negative | 859152 - 860168 | 38316.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
