Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | AZ78 unitig_4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1048103 bp
Thymine Count
1042384 bp
Guanine Count
2086961 bp
Cytosine Count
2092676 bp
Genome Length
6270124 bp
Protein-coding Genes
5260 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polymyxin synthetase pmxb | AZ78_0501 | Not Available | Positive | 695927 - 696145 | 8225.59 |
| mfs permease | AZ78_0502 | Not Available | Negative | 696576 - 698063 | 53178.8 |
| cytochrome o ubiquinol oxidase subunit ii | AZ78_0503 | Not Available | Positive | 698508 - 699674 | 42090.4 |
| cytochrome o ubiquinol oxidase subunit i | AZ78_0504 | Not Available | Positive | 699775 - 701781 | 74884.8 |
| cytochrome o ubiquinol oxidase subunit iii | AZ78_0505 | Not Available | Positive | 701774 - 702409 | 23237.7 |
| cytochrome o ubiquinol oxidase subunit iv | AZ78_0506 | Not Available | Positive | 702406 - 702819 | 15147.7 |
| cytochrome oxidase biogenesis protein surf1, facilitates heme a insertion | AZ78_0507 | Not Available | Positive | 703144 - 703908 | 27891.6 |
| sensor histidine kinase prrb (regb) | AZ78_0508 | Not Available | Positive | 704068 - 705360 | 46603.0 |
| dna binding response regulator prra (rega) | AZ78_0509 | Not Available | Positive | 705353 - 705940 | 21478.3 |
| bara-associated response regulator uvry | AZ78_0510 | Not Available | Negative | 706065 - 706679 | 22376.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
