Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | AZ78 unitig_4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1048103 bp
Thymine Count
1042384 bp
Guanine Count
2086961 bp
Cytosine Count
2092676 bp
Genome Length
6270124 bp
Protein-coding Genes
5260 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail tubular protein b | AZ78_1300 | Not Available | Positive | 1591229 - 1593355 | 78395.8 |
| Putative internal virion protein | AZ78_1304 | Not Available | Positive | 1596488 - 1600123 | 133403.0 |
| Tail fiber protein | AZ78_1305 | Not Available | Positive | 1600133 - 1602241 | 74549.5 |
| Hypothetical protein | AZ78_1306 | Not Available | Positive | 1602255 - 1604279 | 70064.7 |
| hypothetical protein | AZ78_1307 | Not Available | Positive | 1604490 - 1604741 | 8670.88 |
| Holin | AZ78_1308 | Not Available | Positive | 1604742 - 1605011 | 9104.6 |
| Hypothetical protein | AZ78_1309 | Not Available | Positive | 1605008 - 1605256 | 8584.08 |
| Dna maturase b | AZ78_1310 | Not Available | Positive | 1605256 - 1606998 | 66164.7 |
| hypothetical protein | AZ78_1311 | Not Available | Positive | 1607006 - 1607212 | 7195.62 |
| N-acetylmuramoyl-l-alanine amidase | AZ78_1312 | Not Available | Positive | 1607209 - 1607646 | 16112.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
