Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | AZ78 unitig_4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1048103 bp
Thymine Count
1042384 bp
Guanine Count
2086961 bp
Cytosine Count
2092676 bp
Genome Length
6270124 bp
Protein-coding Genes
5260 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vibriolysin, extracellular zinc protease | AZ78_0270 | Not Available | Negative | 311352 - 313244 | 66516.0 |
| hypothetical protein | AZ78_0271 | Not Available | Positive | 313239 - 313430 | 7332.86 |
| vibriolysin, extracellular zinc protease | AZ78_0272 | Not Available | Negative | 314047 - 315597 | 54975.8 |
| vibriolysin, extracellular zinc protease | AZ78_0273 | Not Available | Negative | 316370 - 318286 | 67856.2 |
| hypothetical protein | AZ78_0274 | Not Available | Positive | 318365 - 318562 | 7391.08 |
| alpha-2-macroglobulin | AZ78_0275 | Not Available | Positive | 319297 - 324270 | 179825.0 |
| hypothetical protein | AZ78_0276 | Not Available | Positive | 324297 - 325361 | 38627.4 |
| hypothetical protein | AZ78_0277 | Not Available | Positive | 325472 - 326476 | 35812.5 |
| penicillin-insensitive transglycosylase & transpeptidase pbp-1c | AZ78_0278 | Not Available | Positive | 326622 - 329045 | 88006.7 |
| putative conserved transmembrane alanine amd leucine rich protein | AZ78_0279 | Not Available | Negative | 329086 - 329754 | 24277.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
