Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | AZ78 unitig_4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1048103 bp
Thymine Count
1042384 bp
Guanine Count
2086961 bp
Cytosine Count
2092676 bp
Genome Length
6270124 bp
Protein-coding Genes
5260 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| epi-inositol hydrolase | AZ78_0259 | Not Available | Positive | 297947 - 299890 | 69005.4 |
| inosose dehydratase | AZ78_0260 | Not Available | Positive | 299883 - 300800 | 33195.6 |
| 5-deoxy-glucuronate isomerase | AZ78_0261 | Not Available | Positive | 300797 - 301594 | 29312.8 |
| methylmalonate-semialdehyde dehydrogenase | AZ78_0262 | Not Available | Positive | 301621 - 303144 | 53761.9 |
| putative porin b precursor outer transmembrane protein | AZ78_0263 | Not Available | Positive | 303230 - 304540 | 47442.5 |
| protein ycei precursor | AZ78_0264 | Not Available | Positive | 304660 - 305466 | 29189.3 |
| extracellular protease | AZ78_0265 | Not Available | Negative | 305697 - 307907 | 75153.7 |
| hypothetical protein | AZ78_0266 | Not Available | Negative | 308009 - 308140 | 4600.27 |
| protein of unknown function duf1428 | AZ78_0268 | Not Available | Positive | 310136 - 310489 | 13296.2 |
| hypothetical protein | AZ78_0269 | Not Available | Negative | 310637 - 310981 | 12398.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
