Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | AZ78 unitig_4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1048103 bp
Thymine Count
1042384 bp
Guanine Count
2086961 bp
Cytosine Count
2092676 bp
Genome Length
6270124 bp
Protein-coding Genes
5260 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylthioribose-1-phosphate isomerase | AZ78_0249 | Not Available | Positive | 284925 - 285983 | 37171.5 |
| hypothetical protein | AZ78_0250 | Not Available | Negative | 286297 - 286695 | 14445.2 |
| dna gyrase subunit a | AZ78_0251 | Not Available | Positive | 286771 - 289521 | 100829.0 |
| myo-inositol 2-dehydrogenase | AZ78_0252 | Not Available | Negative | 289648 - 290658 | 37043.1 |
| myo-inositol 2-dehydrogenase | AZ78_0253 | Not Available | Negative | 290737 - 291714 | 35008.6 |
| putative transcriptional regulator of the myo-inositol catabolic operon | AZ78_0254 | Not Available | Negative | 291722 - 292588 | 32289.6 |
| inositol transport system sugar-binding protein | AZ78_0255 | Not Available | Positive | 292785 - 293885 | 38443.7 |
| inositol transport system permease protein | AZ78_0256 | Not Available | Positive | 294043 - 295152 | 38909.3 |
| inositol transport system atp-binding protein | AZ78_0257 | Not Available | Positive | 295163 - 295954 | 28793.2 |
| 5-keto-2-deoxygluconokinase | AZ78_0258 | Not Available | Positive | 295995 - 297950 | 71395.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
