Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | AZ78 unitig_4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1048103 bp
Thymine Count
1042384 bp
Guanine Count
2086961 bp
Cytosine Count
2092676 bp
Genome Length
6270124 bp
Protein-coding Genes
5260 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AZ78_0121 | Not Available | Negative | 129944 - 131011 | 38090.9 |
| phosphatidylserine decarboxylase | AZ78_0122 | Not Available | Negative | 131043 - 131891 | 30840.2 |
| cytochrome oxidase biogenesis protein sco1/senc/prrc, putative copper metallochaperone | AZ78_0123 | Not Available | Negative | 131888 - 132532 | 23131.8 |
| protein-n(5)-glutamine methyltransferase prmb, methylates lsu ribosomal protein l3p | AZ78_0124 | Not Available | Positive | 132867 - 133796 | 33698.9 |
| hypothetical protein | AZ78_0125 | Not Available | Negative | 134341 - 134523 | 6336.76 |
| chorismate synthase | AZ78_0126 | Not Available | Positive | 134500 - 135582 | 38435.4 |
| glyoxylate reductase | AZ78_0127 | Not Available | Positive | 135575 - 136567 | 35271.2 |
| aspartate-semialdehyde dehydrogenase | AZ78_0128 | Not Available | Positive | 136705 - 137727 | 36486.6 |
| hypothetical protein | AZ78_0129 | Not Available | Negative | 138150 - 138329 | 6364.28 |
| tfp pilus assembly protein fimv | AZ78_0130 | Not Available | Positive | 138351 - 140252 | 65762.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
