Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | AZ78 unitig_4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1048103 bp
Thymine Count
1042384 bp
Guanine Count
2086961 bp
Cytosine Count
2092676 bp
Genome Length
6270124 bp
Protein-coding Genes
5260 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AZ78_0940 | Not Available | Negative | 1186356 - 1186775 | 15409.2 |
| hypothetical protein | AZ78_0941 | Not Available | Negative | 1186917 - 1187258 | 11558.1 |
| succinate dehydrogenase iron-sulfur protein | AZ78_0942 | Not Available | Negative | 1187375 - 1188232 | 32017.3 |
| succinate dehydrogenase flavoprotein subunit | AZ78_0943 | Not Available | Negative | 1188243 - 1190036 | 64939.1 |
| succinate dehydrogenase hydrophobic membrane anchor protein | AZ78_0944 | Not Available | Negative | 1190040 - 1190438 | 13887.3 |
| succinate dehydrogenase cytochrome b-556 subunit | AZ78_0945 | Not Available | Negative | 1190435 - 1190770 | 11988.9 |
| folate-dependent protein for fe/s cluster synthesis/repair in oxidative stress | AZ78_0946 | Not Available | Positive | 1191195 - 1192067 | 30619.5 |
| branched-chain alpha-keto acid dehydrogenase, e1 component, alpha subunit | AZ78_0947 | Not Available | Negative | 1192477 - 1194807 | 84210.6 |
| glutathione s-transferase | AZ78_0948 | Not Available | Negative | 1194855 - 1195496 | 23917.3 |
| acetyltransferase, gnat family | AZ78_0949 | Not Available | Negative | 1195493 - 1196056 | 20997.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
