Fusobacterium necrophorum DJ-2

anaerobic

Kingdom

Fusobacteriati

Phylum

Fusobacteriota

Class

Fusobacteriia

Order

Fusobacteriales

Family

Fusobacteriaceae

Genus

Fusobacterium

Description

Fusobacterium necrophorum DJ-2 is a Gram-negative, anaerobic bacterium characterized by the presence of flagella. This organism is part of the Fusobacterium genus, which is known for its role in various infections, particularly in humans and animals. The specific strain DJ-2 is notable for its single replicon structure, indicating a relatively straightforward genomic organization. As an anaerobe, F. necrophorum DJ-2 thrives in environments devoid of oxygen, which is typical for many members of its genus that are often isolated from anaerobic habitats, including the oral cavity and various abscesses. The flagella present in this strain suggest an ability to move toward favorable conditions or away from harmful environments, which can be crucial for its survival and pathogenicity. The genomic data for this strain is cataloged under the accession number JAAH00000000.1, which provides a reference point for further genomic and functional studies. Understanding the genetic makeup of F. necrophorum DJ-2 could shed light on its virulence factors and metabolic pathways, potentially informing treatment strategies for infections it may cause. From an ecological standpoint, the presence of this bacterium in anaerobic environments underscores its role in the microbial community, where it may contribute to nutrient cycling and interact with other microorganisms. Its anaerobic lifestyle and motility highlight its adaptability in complex ecosystems, which can have implications for both health and disease in hosts.

Taxonomy

KingdomFusobacteriati
PhylumFusobacteriota
ClassFusobacteriia
OrderFusobacteriales
FamilyFusobacteriaceae
GenusFusobacterium
SpeciesFusobacterium necrophorum
StrainDJ-2

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fusobacterium necrophorum DJ-2 contig0229, whole genome shotgun

Gene Summary

Adenine Count

824744 bp

Thymine Count

840097 bp

Guanine Count

412961 bp

Cytosine Count

443005 bp

Genome Length

2520807 bp

Protein-coding Genes

2344 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysine 2,3-aminomutaseFUSO8_00200Not AvailableNegative39379 - 4063847792.7
l-erythro-3,5-diaminohexanoate dehydrogenaseFUSO8_00205Not AvailableNegative40701 - 4173836844.1
3-keto-5-aminohexanoate cleavage enzymeFUSO8_00210Not AvailableNegative41762 - 4257729652.8
3-aminobutyryl-coa ammonia lyaseFUSO8_00215Not AvailableNegative42612 - 4299513905.8
hypothetical proteinFUSO8_00220Not AvailableNegative43537 - 4382111235.2
hypothetical proteinFUSO8_00225Not AvailableNegative43818 - 439554997.99
hypothetical proteinFUSO8_00230Not AvailableNegative43946 - 440956035.61
dna-binding proteinFUSO8_00235Not AvailablePositive44262 - 4453710407.6
l-allo-threonine dehydrogenaseFUSO8_00240Not AvailablePositive44652 - 4545229310.5
hit family hydrolaseFUSO8_00245Not AvailableNegative45619 - 4595712471.2

Displaying genes 81 – 90 of 2413 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.