Fusobacterium necrophorum DJ-2

anaerobic

Kingdom

Fusobacteriati

Phylum

Fusobacteriota

Class

Fusobacteriia

Order

Fusobacteriales

Family

Fusobacteriaceae

Genus

Fusobacterium

Description

Fusobacterium necrophorum DJ-2 is a Gram-negative, anaerobic bacterium characterized by the presence of flagella. This organism is part of the Fusobacterium genus, which is known for its role in various infections, particularly in humans and animals. The specific strain DJ-2 is notable for its single replicon structure, indicating a relatively straightforward genomic organization. As an anaerobe, F. necrophorum DJ-2 thrives in environments devoid of oxygen, which is typical for many members of its genus that are often isolated from anaerobic habitats, including the oral cavity and various abscesses. The flagella present in this strain suggest an ability to move toward favorable conditions or away from harmful environments, which can be crucial for its survival and pathogenicity. The genomic data for this strain is cataloged under the accession number JAAH00000000.1, which provides a reference point for further genomic and functional studies. Understanding the genetic makeup of F. necrophorum DJ-2 could shed light on its virulence factors and metabolic pathways, potentially informing treatment strategies for infections it may cause. From an ecological standpoint, the presence of this bacterium in anaerobic environments underscores its role in the microbial community, where it may contribute to nutrient cycling and interact with other microorganisms. Its anaerobic lifestyle and motility highlight its adaptability in complex ecosystems, which can have implications for both health and disease in hosts.

Taxonomy

KingdomFusobacteriati
PhylumFusobacteriota
ClassFusobacteriia
OrderFusobacteriales
FamilyFusobacteriaceae
GenusFusobacterium
SpeciesFusobacterium necrophorum
StrainDJ-2

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fusobacterium necrophorum DJ-2 contig0229, whole genome shotgun

Gene Summary

Adenine Count

824744 bp

Thymine Count

840097 bp

Guanine Count

412961 bp

Cytosine Count

443005 bp

Genome Length

2520807 bp

Protein-coding Genes

2344 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphopentomutaseFUSO8_01945Not AvailableNegative393744 - 39493444378.9
purine nucleoside phosphorylaseFUSO8_01950Not AvailableNegative394958 - 39567126277.5
cytidine deaminaseFUSO8_01955Not AvailableNegative395683 - 39608114605.6
nucleoside transporterFUSO8_01960Not AvailableNegative396096 - 39731943027.8
5'-nucleotidaseFUSO8_01965Not AvailableNegative397358 - 39820932720.1
uridine phosphorylaseFUSO8_01970Not AvailableNegative398242 - 39901228079.9
gntr family transcriptional regulatorFUSO8_01975Not AvailableNegative399123 - 39984528073.3
hypothetical proteinFUSO8_01985Not AvailableNegative400064 - 4002676445.04
hypothetical proteinFUSO8_01990Not AvailablePositive400423 - 4005826343.47
hypothetical proteinFUSO8_01995Not AvailablePositive400603 - 4008429122.86

Displaying genes 421 – 430 of 2413 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.