Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s6p | SAMN05421757_102116 | Not Available | Positive | 1034789 - 1035145 | 13795.5 |
| ssu ribosomal protein s18p | SAMN05421757_102117 | Not Available | Positive | 1035175 - 1035402 | 8621.73 |
| lsu ribosomal protein l9p | SAMN05421757_102118 | Not Available | Positive | 1035415 - 1036038 | 22285.9 |
| chaperone modulatory protein cbpm | SAMN05421757_102119 | Not Available | Negative | 1036113 - 1036457 | 12822.7 |
| dnaj-class molecular chaperone with c-terminal zn finger domain | SAMN05421757_102120 | Not Available | Negative | 1036454 - 1037386 | 33831.9 |
| protein of unknown function | SAMN05421757_102121 | Not Available | Negative | 1037499 - 1038083 | 21366.2 |
| trigger factor | SAMN05421757_102122 | Not Available | Negative | 1038260 - 1039591 | 49129.6 |
| Trna-leu | Not Available | Not Available | Positive | 1039729 - 1039813 | Not Available |
| hint domain-containing protein | SAMN05421757_102124 | Not Available | Positive | 1040027 - 1040500 | 16859.5 |
| mg2+ and co2+ transporter corb, contains duf21, cbs pair, and corc-hlyc domains | SAMN05421757_102125 | Not Available | Positive | 1040576 - 1041877 | 47593.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
