Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase e1 component beta subunit | SAMN05421757_10289 | Not Available | Positive | 1009686 - 1011059 | 48571.9 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN05421757_10290 | Not Available | Positive | 1011070 - 1012383 | 44909.0 |
| hypothetical protein | SAMN05421757_10291 | Not Available | Negative | 1012397 - 1013272 | 32082.7 |
| hypothetical protein | SAMN05421757_102109 | Not Available | Negative | 1028586 - 1028927 | 12419.7 |
| upf0755 protein | SAMN05421757_102110 | Not Available | Negative | 1029117 - 1030271 | 41152.9 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN05421757_102111 | Not Available | Negative | 1030271 - 1031533 | 43842.0 |
| acyl carrier protein | SAMN05421757_102112 | Not Available | Negative | 1031740 - 1031973 | 8394.69 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN05421757_102113 | Not Available | Negative | 1032282 - 1033019 | 25214.8 |
| [acyl-carrier-protein] s-malonyltransferase | SAMN05421757_102114 | Not Available | Negative | 1033109 - 1034044 | 32022.5 |
| hypothetical protein | SAMN05421757_102115 | Not Available | Positive | 1034234 - 1034602 | 12674.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
