Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation transport protein chac | SAMN05421757_10279 | Not Available | Negative | 1000118 - 1000849 | 27176.3 |
| peptidylprolyl isomerase | SAMN05421757_10280 | Not Available | Negative | 1000952 - 1001569 | 21038.8 |
| peptidylprolyl isomerase/peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN05421757_10281 | Not Available | Negative | 1001562 - 1002062 | 17998.3 |
| phosphoglycerate kinase | SAMN05421757_10282 | Not Available | Positive | 1002206 - 1003381 | 40849.4 |
| hypothetical protein | SAMN05421757_10283 | Not Available | Positive | 1003638 - 1003919 | 9941.91 |
| hypothetical protein | SAMN05421757_10284 | Not Available | Positive | 1004087 - 1004680 | 20488.6 |
| fructose-bisphosphate aldolase | SAMN05421757_10285 | Not Available | Positive | 1004903 - 1005832 | 32790.2 |
| long-chain acyl-coa synthetase | SAMN05421757_10286 | Not Available | Positive | 1006037 - 1007833 | 64658.0 |
| cell division protein ftsb | SAMN05421757_10287 | Not Available | Positive | 1007995 - 1008297 | 11390.7 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN05421757_10288 | Not Available | Positive | 1008661 - 1009671 | 37185.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
