Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dithiol-disulfide isomerase, dsba family | SAMN05421757_10269 | Not Available | Positive | 985866 - 986498 | 23280.8 |
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN05421757_10270 | Not Available | Positive | 986616 - 987827 | 42872.8 |
| transcription-repair coupling factor | SAMN05421757_10271 | Not Available | Negative | 987828 - 991286 | 126565.0 |
| elwxxdgt repeat-containing protein | SAMN05421757_10272 | Not Available | Negative | 991416 - 993449 | 69962.3 |
| hypothetical protein | SAMN05421757_10273 | Not Available | Negative | 993624 - 994142 | 19868.6 |
| porphobilinogen synthase | SAMN05421757_10274 | Not Available | Positive | 994329 - 995330 | 35629.9 |
| las17-binding protein actin regulator | SAMN05421757_10275 | Not Available | Positive | 995488 - 996057 | 19813.4 |
| phosphate:na+ symporter | SAMN05421757_10276 | Not Available | Negative | 996073 - 997689 | 56446.7 |
| protein of unknown function | SAMN05421757_10277 | Not Available | Negative | 997778 - 998746 | 35901.4 |
| hypothetical protein | SAMN05421757_10278 | Not Available | Negative | 998830 - 1000152 | 47881.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
