Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribodipyrimidine photo-lyase | SAMN05421757_1029 | Not Available | Negative | 924361 - 925782 | 53158.7 |
| hypothetical protein | SAMN05421757_10210 | Not Available | Negative | 925866 - 926129 | 9964.62 |
| cysteine desulfurase family protein, vc1184 subfamily | SAMN05421757_10211 | Not Available | Negative | 926220 - 927446 | 43831.8 |
| betaine/carnitine transporter, bcct family | SAMN05421757_10212 | Not Available | Negative | 927549 - 929186 | 58439.9 |
| nucleotide-binding universal stress protein, uspa family | SAMN05421757_10213 | Not Available | Negative | 929236 - 929652 | 14724.9 |
| acrylyl-coa reductase (nadph) | SAMN05421757_10214 | Not Available | Negative | 929914 - 930900 | 34599.9 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN05421757_10215 | Not Available | Negative | 930949 - 931455 | 18911.7 |
| rubrerythrin | SAMN05421757_10216 | Not Available | Negative | 931640 - 932617 | 35397.2 |
| Tmrna,resume consensus sequence (at 199): cataattgccaacgacaa | Not Available | Not Available | Positive | 932709 - 933043 | Not Available |
| snoal-like polyketide cyclase | SAMN05421757_10218 | Not Available | Positive | 933121 - 933549 | 15539.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
