Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase | SAMN05421757_10148 | Not Available | Negative | 56700 - 58199 | 52888.4 |
| putative hydrolase of the had superfamily | SAMN05421757_10149 | Not Available | Negative | 58379 - 59077 | 26005.8 |
| atp-dependent clp protease adaptor protein clps | SAMN05421757_10150 | Not Available | Positive | 59188 - 59535 | 13194.0 |
| hypothetical protein | SAMN05421757_10151 | Not Available | Negative | 59628 - 60860 | 45939.0 |
| moxr-like atpase | SAMN05421757_10152 | Not Available | Negative | 60857 - 61771 | 33163.8 |
| xanthine dehydrogenase accessory factor | SAMN05421757_10153 | Not Available | Positive | 61965 - 62831 | 30814.2 |
| molybdenum cofactor cytidylyltransferase | SAMN05421757_10154 | Not Available | Positive | 62828 - 63421 | 20183.4 |
| dipeptide transport system substrate-binding protein | SAMN05421757_10155 | Not Available | Positive | 63558 - 65150 | 58964.3 |
| xaa-pro aminopeptidase | SAMN05421757_10156 | Not Available | Positive | 65211 - 66302 | 39416.8 |
| dipeptide transport system permease protein | SAMN05421757_10157 | Not Available | Positive | 66302 - 67309 | 37001.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
