Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_101853 | Not Available | Negative | 912670 - 912987 | 11461.8 |
| hnh endonuclease | SAMN05421757_101854 | Not Available | Negative | 912994 - 913572 | 22336.9 |
| cadherin domain-containing protein | SAMN05421757_1021 | Not Available | Negative | 914592 - 915638 | 35063.4 |
| Trna-ser | Not Available | Not Available | Positive | 916879 - 916968 | Not Available |
| ala-trna(pro) hydrolase | SAMN05421757_1023 | Not Available | Negative | 917041 - 917760 | 25763.1 |
| small-conductance mechanosensitive channel | SAMN05421757_1024 | Not Available | Negative | 917757 - 920285 | 89693.5 |
| cysteine synthase a | SAMN05421757_1025 | Not Available | Negative | 920288 - 921322 | 35853.1 |
| nudix-type nucleoside diphosphatase, yffh/adpp family | SAMN05421757_1026 | Not Available | Negative | 921378 - 922502 | 41125.1 |
| hypothetical protein | SAMN05421757_1027 | Not Available | Negative | 922538 - 922981 | 15966.9 |
| cyclopropane-fatty-acyl-phospholipid synthase | SAMN05421757_1028 | Not Available | Negative | 923010 - 924221 | 46472.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
