Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multiple sugar transport system atp-binding protein | SAMN05421757_101843 | Not Available | Positive | 900271 - 901308 | 37807.6 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN05421757_101844 | Not Available | Positive | 901736 - 904291 | 87727.9 |
| hypothetical protein | SAMN05421757_101845 | Not Available | Positive | 904291 - 904407 | 4067.88 |
| neurotransmitter:na+ symporter, nss family | SAMN05421757_101846 | Not Available | Positive | 904866 - 906209 | 46570.2 |
| hypothetical protein | SAMN05421757_101847 | Not Available | Negative | 906474 - 906971 | 17609.1 |
| trap transporter solute receptor, taxi family | SAMN05421757_101848 | Not Available | Positive | 907104 - 908066 | 33661.1 |
| trap transporter, 4tm/12tm fusion protein | SAMN05421757_101849 | Not Available | Positive | 908127 - 909893 | 60539.0 |
| hypothetical protein | SAMN05421757_101850 | Not Available | Negative | 910752 - 911012 | 9514.06 |
| hypothetical protein | SAMN05421757_101851 | Not Available | Negative | 911027 - 911851 | 30564.1 |
| hypothetical protein | SAMN05421757_101852 | Not Available | Negative | 911823 - 912683 | 32983.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
