Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized iron-regulated membrane protein | SAMN05421757_101833 | Not Available | Negative | 887761 - 889161 | 50564.1 |
| hypothetical protein | SAMN05421757_101834 | Not Available | Negative | 889200 - 889586 | 13146.2 |
| transcriptional regulator, arac family | SAMN05421757_101835 | Not Available | Negative | 890215 - 892557 | 84630.5 |
| acetamidase/formamidase | SAMN05421757_101836 | Not Available | Positive | 892899 - 894350 | 52018.1 |
| transcriptional regulator, laci family | SAMN05421757_101837 | Not Available | Positive | 894515 - 895582 | 39005.6 |
| multiple sugar transport system substrate-binding protein | SAMN05421757_101838 | Not Available | Positive | 895609 - 896070 | 16279.2 |
| multiple sugar transport system substrate-binding protein | SAMN05421757_101839 | Not Available | Positive | 896104 - 896868 | 26635.4 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05421757_101840 | Not Available | Positive | 896879 - 897784 | 33383.6 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05421757_101841 | Not Available | Positive | 897781 - 898623 | 31448.3 |
| fad dependent oxidoreductase | SAMN05421757_101842 | Not Available | Positive | 898630 - 900246 | 59854.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
