Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyanuric acid amidohydrolase | SAMN05421757_101823 | Not Available | Positive | 877858 - 878991 | 39051.4 |
| salicylate hydroxylase | SAMN05421757_101824 | Not Available | Positive | 878988 - 880199 | 43576.9 |
| nitt/taut family transport system substrate-binding protein | SAMN05421757_101825 | Not Available | Positive | 880267 - 881253 | 34509.2 |
| nitt/taut family transport system atp-binding protein | SAMN05421757_101826 | Not Available | Positive | 881271 - 882137 | 32391.8 |
| nitt/taut family transport system permease protein | SAMN05421757_101827 | Not Available | Positive | 882134 - 882913 | 28292.3 |
| barbiturase | SAMN05421757_101828 | Not Available | Positive | 882917 - 883981 | 35853.7 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05421757_101829 | Not Available | Positive | 883985 - 885313 | 45916.6 |
| solute carrier family 10 (sodium/bile acid cotransporter), member 7 | SAMN05421757_101830 | Not Available | Positive | 885344 - 886351 | 35034.1 |
| hypothetical protein | SAMN05421757_101831 | Not Available | Negative | 886579 - 886704 | 4903.97 |
| hypothetical protein | SAMN05421757_101832 | Not Available | Negative | 886856 - 887071 | 8112.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
