Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase | SAMN05421757_101783 | Not Available | Positive | 814062 - 815579 | 54974.4 |
| hypothetical protein | SAMN05421757_101784 | Not Available | Positive | 815602 - 816372 | 27554.2 |
| imidazolonepropionase | SAMN05421757_101785 | Not Available | Positive | 816369 - 817715 | 47798.1 |
| hypothetical protein | SAMN05421757_101786 | Not Available | Positive | 817854 - 818612 | 27431.8 |
| surface antigen | SAMN05421757_101787 | Not Available | Positive | 818734 - 819915 | 41441.3 |
| putative abc transport system atp-binding protein | SAMN05421757_101788 | Not Available | Positive | 819954 - 820658 | 25128.5 |
| putative abc transport system permease protein | SAMN05421757_101789 | Not Available | Positive | 820652 - 821953 | 45897.7 |
| hypothetical protein | SAMN05421757_101790 | Not Available | Positive | 821972 - 822625 | 24068.7 |
| mscs family membrane protein | SAMN05421757_101791 | Not Available | Positive | 822665 - 824572 | 69291.4 |
| transposase dde domain-containing protein | SAMN05421757_101792 | Not Available | Negative | 824641 - 825018 | 14740.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
