Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | SAMN05421757_101773 | Not Available | Negative | 803165 - 803485 | 12383.9 |
| transposase | SAMN05421757_101774 | Not Available | Positive | 803581 - 804837 | 47382.1 |
| integrase core domain-containing protein | SAMN05421757_101775 | Not Available | Negative | 805044 - 805550 | 20021.4 |
| transposase | SAMN05421757_101776 | Not Available | Positive | 805849 - 806865 | 38170.5 |
| transposase | SAMN05421757_101777 | Not Available | Negative | 807049 - 807231 | 6828.22 |
| putative phage tail protein | SAMN05421757_101778 | Not Available | Positive | 807396 - 809036 | 58945.5 |
| protein of unknown function | SAMN05421757_101779 | Not Available | Positive | 809049 - 810167 | 40015.6 |
| arac-type dna-binding protein | SAMN05421757_101780 | Not Available | Negative | 810294 - 811232 | 34623.4 |
| hypothetical protein | SAMN05421757_101781 | Not Available | Positive | 811452 - 812267 | 29922.2 |
| dihydroorotase | SAMN05421757_101782 | Not Available | Positive | 812324 - 813871 | 55632.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
