Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein hu-alpha | SAMN05421757_101763 | Not Available | Positive | 792969 - 793301 | 11591.9 |
| Trna-val | Not Available | Not Available | Positive | 793354 - 793425 | Not Available |
| arsenical resistance protein arsh | SAMN05421757_101765 | Not Available | Positive | 793809 - 794543 | 27577.1 |
| ricin-type beta-trefoil lectin domain-containing protein | SAMN05421757_101766 | Not Available | Negative | 794584 - 795120 | 18599.4 |
| hypothetical protein | SAMN05421757_101767 | Not Available | Negative | 795153 - 795719 | 20006.6 |
| protein of unknown function | SAMN05421757_101768 | Not Available | Negative | 795768 - 797003 | 44755.5 |
| arsenate reductase | SAMN05421757_101769 | Not Available | Negative | 797301 - 797720 | 15318.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421757_101770 | Not Available | Negative | 797932 - 798672 | 25207.1 |
| transcriptional regulator, lysr family | SAMN05421757_101771 | Not Available | Positive | 798786 - 799676 | 32825.4 |
| protein translocase subunit secf /protein translocase subunit secd | SAMN05421757_101772 | Not Available | Positive | 800168 - 802840 | 94704.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
