Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite reductase (nadph) hemoprotein beta-component | SAMN05421757_101743 | Not Available | Negative | 767056 - 768720 | 61695.4 |
| protein of unknown function | SAMN05421757_101744 | Not Available | Negative | 768796 - 769104 | 11290.1 |
| uroporphyrinogen-iii c-methyltransferase | SAMN05421757_101745 | Not Available | Negative | 769104 - 770504 | 48922.6 |
| transcriptional regulator, asnc family | SAMN05421757_101746 | Not Available | Positive | 770648 - 771115 | 17525.1 |
| unspecific monooxygenase | SAMN05421757_101747 | Not Available | Negative | 771198 - 772379 | 43555.2 |
| two-component system, ntrc family, c4-dicarboxylate transport sensor histidine kinase dctb | SAMN05421757_101748 | Not Available | Positive | 772505 - 774280 | 63367.5 |
| two-component system, ntrc family, c4-dicarboxylate transport response regulator dctd | SAMN05421757_101749 | Not Available | Positive | 774277 - 775506 | 44147.2 |
| c4-dicarboxylate-binding protein dctp | SAMN05421757_101750 | Not Available | Positive | 775829 - 776830 | 36657.3 |
| c4-dicarboxylate transporter, dctq subunit | SAMN05421757_101751 | Not Available | Positive | 776908 - 777609 | 26139.9 |
| c4-dicarboxylate transporter, dctm subunit | SAMN05421757_101752 | Not Available | Positive | 777616 - 779010 | 48953.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
