Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein | SAMN05421757_101732 | Not Available | Positive | 758204 - 758815 | 21513.8 |
| hypothetical protein | SAMN05421757_101733 | Not Available | Negative | 758837 - 759796 | 35854.4 |
| hypothetical protein | SAMN05421757_101734 | Not Available | Negative | 759840 - 760424 | 20541.9 |
| arginase | SAMN05421757_101735 | Not Available | Positive | 761287 - 762216 | 32922.3 |
| major facilitator superfamily protein | SAMN05421757_101736 | Not Available | Positive | 762293 - 763510 | 42103.3 |
| bacterial translation initiation factor 3 (bif-3) | SAMN05421757_101738 | Not Available | Negative | 763592 - 764002 | 15839.4 |
| hypothetical protein | SAMN05421757_101739 | Not Available | Positive | 764382 - 764906 | 17864.6 |
| ferredoxin--nadp+ reductase | SAMN05421757_101740 | Not Available | Negative | 764976 - 765833 | 32363.7 |
| protein of unknown function | SAMN05421757_101741 | Not Available | Negative | 765899 - 766312 | 15067.6 |
| phosphoadenylylsulfate reductase (thioredoxin) | SAMN05421757_101742 | Not Available | Negative | 766329 - 767087 | 27516.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
