Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_101632 | Not Available | Negative | 655266 - 655745 | 17488.3 |
| biotin-(acetyl-coa carboxylase) ligase | SAMN05421757_101633 | Not Available | Negative | 655742 - 656458 | 25417.4 |
| atp-binding protein involved in chromosome partitioning | SAMN05421757_101634 | Not Available | Negative | 656455 - 657522 | 36506.4 |
| hypothetical protein | SAMN05421757_101635 | Not Available | Negative | 657527 - 657718 | 6935.31 |
| hypothetical protein | SAMN05421757_101636 | Not Available | Positive | 657775 - 658521 | 26617.8 |
| 4fe-4s dicluster domain-containing protein | SAMN05421757_101637 | Not Available | Negative | 658515 - 660464 | 68612.1 |
| protein of unknown function | SAMN05421757_101638 | Not Available | Positive | 660781 - 661371 | 22134.4 |
| protein of unknown function | SAMN05421757_101639 | Not Available | Positive | 661368 - 661943 | 20736.8 |
| chaperone tord involved in molybdoenzyme tora maturation | SAMN05421757_101640 | Not Available | Positive | 661943 - 662575 | 23024.7 |
| formate dehydrogenase region tat target | SAMN05421757_101641 | Not Available | Positive | 662633 - 662824 | 6558.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
