Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine transport system atp-binding protein | SAMN05421757_101622 | Not Available | Negative | 644532 - 645641 | 39790.7 |
| spermidine/putrescine transport system substrate-binding protein | SAMN05421757_101623 | Not Available | Negative | 645719 - 646792 | 38833.9 |
| two-component system, ntrc family, sensor kinase | SAMN05421757_101624 | Not Available | Positive | 647016 - 648983 | 70773.9 |
| molybdopterin molybdotransferase | SAMN05421757_101625 | Not Available | Negative | 649076 - 650794 | 59333.6 |
| molybdopterin guanine dinucleotide biosynthesis accessory protein mobb | SAMN05421757_101626 | Not Available | Negative | 650791 - 651285 | 17882.4 |
| molybdenum cofactor guanylyltransferase | SAMN05421757_101627 | Not Available | Negative | 651282 - 651893 | 21224.5 |
| fdhd protein | SAMN05421757_101628 | Not Available | Negative | 651886 - 652761 | 32232.7 |
| tungstate transport system permease protein | SAMN05421757_101629 | Not Available | Positive | 653012 - 653716 | 25297.9 |
| tungstate transport system atp-binding protein | SAMN05421757_101630 | Not Available | Positive | 653713 - 654426 | 25601.3 |
| tungstate transport system substrate-binding protein | SAMN05421757_101631 | Not Available | Positive | 654423 - 655232 | 28599.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
