Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfoacetaldehyde acetyltransferase | SAMN05421757_101602 | Not Available | Negative | 622016 - 623791 | 63352.8 |
| transcriptional regulator, gntr family | SAMN05421757_101603 | Not Available | Negative | 623983 - 625446 | 54167.7 |
| taurine-pyruvate aminotransferase | SAMN05421757_101604 | Not Available | Negative | 625623 - 627002 | 50032.4 |
| taurine transport system substrate-binding protein | SAMN05421757_101605 | Not Available | Positive | 627579 - 628574 | 34795.3 |
| taurine transport system atp-binding protein | SAMN05421757_101606 | Not Available | Positive | 628647 - 629453 | 29990.8 |
| taurine transport system permease protein | SAMN05421757_101607 | Not Available | Positive | 629450 - 630712 | 45086.5 |
| hint domain-containing protein | SAMN05421757_101608 | Not Available | Positive | 631002 - 632099 | 39286.0 |
| d-3-phosphoglycerate dehydrogenase | SAMN05421757_101609 | Not Available | Negative | 632130 - 633098 | 34649.0 |
| 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase | SAMN05421757_101610 | Not Available | Negative | 633199 - 634221 | 36406.0 |
| transcriptional regulator, iclr family | SAMN05421757_101611 | Not Available | Negative | 634310 - 635146 | 30476.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
